Breakfast Egg Muffins with Bacon

Featured in: Weekend Hearth-Style Treats

These warm, handheld muffins combine fluffy eggs with melted cheddar, smoky bacon, and vibrant bell peppers for a satisfying breakfast you can prepare in advance. Simply whisk eggs with milk, fold in your favorite fillings, and bake until golden and set. They're perfect for meal prep—store them in the fridge and reheat for a quick, protein-packed morning meal that keeps you fueled throughout busy days.

Updated on Sun, 01 Feb 2026 14:19:00 GMT
Golden-brown Breakfast Egg Muffins packed with melted cheddar, crumbled bacon, and bell peppers, served warm on a plate. Save
Golden-brown Breakfast Egg Muffins packed with melted cheddar, crumbled bacon, and bell peppers, served warm on a plate. | meadowcinder.com

Sunday mornings used to mean chaos in my kitchen until I stumbled on these egg muffins during a particularly frantic week. I had a full carton of eggs, leftover bacon from the weekend, and exactly twelve minutes before my first meeting. What started as desperation became my most-requested breakfast. Now my freezer is never without a batch, and my mornings feel infinitely more manageable.

The first time I brought these to a potluck brunch, three people asked if I'd catered it. I laughed because I'd made them in my pajamas the night before while watching a movie. They disappeared faster than anything else on the table, and I went home with requests for the recipe scribbled on napkins.

Ingredients

  • 6 large eggs: The foundation of these muffins, eggs create that fluffy, satisfying texture that holds everything together beautifully when whisked well with the milk.
  • 1/2 cup milk: This is what makes the muffins light instead of dense, so don't skip it even though it seems like a small amount.
  • 1/2 cup shredded cheddar cheese: Sharp cheddar gives the best flavor, but I've used whatever cheese was open in my fridge and it always works.
  • 1/2 cup diced bell peppers: I love using a mix of colors for visual appeal, and they add a slight sweetness that balances the savory bacon.
  • 1/2 cup diced onions: Yellow onions work perfectly, though I've also used green onions when I wanted a milder flavor.
  • 1/2 cup cooked and crumbled bacon: Cook it until crispy, then crumble it small so every bite gets a little smoky crunch.
  • 1/2 teaspoon salt: Essential for bringing out all the other flavors, but taste your bacon first since some are saltier than others.
  • 1/4 teaspoon black pepper: Freshly ground makes a noticeable difference if you have a pepper mill handy.
  • 1/4 teaspoon garlic powder: Adds a subtle depth without overpowering the other ingredients.
  • 1/4 teaspoon paprika: Just a hint of warmth and color that makes these feel a little special.
  • Cooking spray or olive oil: Greasing the tin well is non-negotiable unless you enjoy chiseling out stuck muffins.

Instructions

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Preheat and Prep Your Pan:
Set your oven to 350°F and generously grease every cup of a standard muffin tin. I learned the hard way that a light misting isn't enough, so really coat those cups.
Whisk the Base:
In a large bowl, whisk the eggs and milk together until you see little bubbles forming on top and the mixture looks pale yellow and unified. This aeration is what gives you a fluffy muffin instead of a rubbery one.
Fold in the Fillings:
Stir in your cheddar, bell peppers, onions, bacon, and all the seasonings until everything is evenly distributed. Try to make sure no single muffin gets all the bacon or all the veggies.
Fill and Bake:
Pour the mixture into each muffin cup, filling them about two-thirds full to leave room for a little puffing. Bake for 18 to 20 minutes until the tops are lightly golden and a toothpick poked in the center comes out clean.
Cool and Release:
Let them rest in the pan for 5 minutes, then run a butter knife around the edges if any seem stuck. They should pop right out and be ready to devour warm or store for later.
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Quickly slice, dice, grate, and spiralize vegetables for salads, stir fries, and faster everyday meal prep.
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Hearty Breakfast Egg Muffins cooling on a wire rack, featuring a fluffy egg texture with savory bacon and cheese. Save
Hearty Breakfast Egg Muffins cooling on a wire rack, featuring a fluffy egg texture with savory bacon and cheese. | meadowcinder.com

My neighbor once told me these egg muffins were the reason her kids stopped complaining about breakfast. She'd warm two in the microwave, hand them over, and actually have time to drink her coffee while it was still hot. That's when I realized this recipe wasn't just convenient for me, it was solving problems in kitchens I'd never even been in.

Making Them Your Own

I've made these muffins a hundred different ways depending on what needed using up. Spinach and feta turned them Mediterranean, diced ham and Swiss made them feel like a quiche, and once I threw in leftover roasted vegetables and they were possibly the best batch yet. The base recipe is really just a starting point.

Storage and Reheating

These keep beautifully in the fridge for up to five days in an airtight container, and I've frozen whole batches wrapped individually in plastic wrap. When I need one, I unwrap it, microwave for about 45 seconds, and it tastes like I just pulled it from the oven. Freezing them has saved me on mornings when I forgot to prep anything the night before.

Serving Suggestions

I usually eat mine plain on the way out the door, but they're wonderful with a dollop of salsa, a drizzle of hot sauce, or even a smear of avocado. My partner likes them with a side of fresh fruit, and I've served them at brunch with a simple green salad and everyone was happy.

  • Try them with a spoonful of sour cream and chives for a loaded baked potato vibe.
  • Pair them with roasted tomatoes or sautéed mushrooms for a heartier plate.
  • Pack them in lunchboxes with some cherry tomatoes and cheese cubes for an easy protein-packed meal.
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Freshly baked Breakfast Egg Muffins with vibrant bell peppers and onions, perfect for a handheld breakfast on busy mornings. Save
Freshly baked Breakfast Egg Muffins with vibrant bell peppers and onions, perfect for a handheld breakfast on busy mornings. | meadowcinder.com

These little muffins have quietly become one of my most reliable kitchen wins. They've fed rushed mornings, impressed guests, and reminded me that the best recipes are the ones you actually make again and again.

Recipe FAQs

Can I freeze these muffins?

Yes, they freeze beautifully. Cool completely, wrap individually, and store in freezer bags for up to 3 months. Thaw overnight in the refrigerator before reheating.

How long do they stay fresh in the refrigerator?

Store cooled muffins in an airtight container in the refrigerator for up to 5 days. Reheat in the microwave for 30-45 seconds until warmed through.

What vegetables work best in these muffins?

Bell peppers, onions, spinach, mushrooms, and diced zucchini all work wonderfully. Sauté vegetables briefly before adding to prevent excess moisture.

Can I make these vegetarian?

Absolutely. Omit the bacon and add extra vegetables like spinach, mushrooms, or diced tomatoes. You can also incorporate feta cheese for a vegetarian protein boost.

Why did my muffins deflate after baking?

Slight deflation is normal as eggs cool. To minimize this, avoid overmixing the batter and let them cool gradually in the tin for 5 minutes before removing.

Can I use egg substitutes or liquid eggs?

Liquid egg products work well. Use 1 ½ cups of liquid eggs equivalent to 6 large eggs. The baking time may vary slightly—check for doneness at 16 minutes.

Breakfast Egg Muffins with Bacon

Protein-rich handheld muffins with eggs, cheddar, and crisp bacon ready in 35 minutes.

Time to prep
10 minutes
Time to cook
20 minutes
Time needed
30 minutes
Author Lily Harris


Skill Level Easy

Cuisine American

Makes 5 Portions

Diet info No Gluten, Reduced carbs

What You Need

Eggs & Dairy

01 6 large eggs
02 1/2 cup whole milk
03 1/2 cup shredded cheddar cheese

Vegetables

01 1/2 cup diced bell peppers (red, green, or yellow)
02 1/2 cup diced onions

Proteins

01 1/2 cup cooked and crumbled bacon

Seasonings

01 1/2 teaspoon salt
02 1/4 teaspoon black pepper
03 1/4 teaspoon garlic powder
04 1/4 teaspoon paprika

For Greasing

01 Cooking spray or olive oil

Directions

Step 01

Preheat oven: Preheat oven to 350°F (175°C).

Step 02

Prepare muffin tin: Grease a standard 12-cup muffin tin with cooking spray or olive oil.

Step 03

Combine eggs and milk: In a large bowl, whisk together eggs and milk until well combined and slightly frothy.

Step 04

Mix filling ingredients: Stir in cheddar cheese, bell peppers, onions, bacon, salt, black pepper, garlic powder, and paprika until evenly mixed.

Step 05

Fill muffin cups: Pour the mixture into the prepared muffin tin, filling each cup approximately 2/3 full.

Step 06

Bake muffins: Bake for 18–20 minutes, or until muffins are set and lightly golden. A toothpick inserted in the center should come out clean.

Step 07

Cool and remove: Remove from oven and let cool for 5 minutes. Carefully loosen muffins with a knife if needed and remove from tin.

Step 08

Serve or store: Serve warm, or cool completely and store in an airtight container in the refrigerator for up to 5 days. Reheat in the microwave before serving.

Tools Needed

  • 12-cup muffin tin
  • Mixing bowl
  • Whisk
  • Measuring cups and spoons
  • Knife and cutting board

Allergy warnings

Scan all components for allergens and seek medical advice if unsure.
  • Contains eggs and dairy
  • May contain pork depending on protein selection
  • Gluten-free as written; verify labels on sausage and other add-ins

Nutrition breakdown (one portion)

For informational use only. Not a substitute for healthcare advice.
  • Calorie count: 150
  • Fat content: 10 grams
  • Carbohydrates: 2 grams
  • Protein amount: 11 grams